Pachypsylla venusta genome assembly v1.0

Principal Investigator(s):  View help for Principal Investigator(s) US Department of Agriculture; National Agricultural Library

Version:  View help for Version V1

Name File Type Size Last Modified
adc_metadata.json application/json 23.1 KB 06/26/2026 04:17:PM
catalog_detail.html text/html 8.6 KB 06/26/2026 11:35:AM
pacven_BCM_assembly_v1-0.tar.gz application/gzip 213.8 MB 06/26/2026 11:35:AM

Project Citation: 

US Department of Agriculture, and National Agricultural Library. Pachypsylla venusta genome assembly v1.0. Ann Arbor, MI: Inter-university Consortium for Political and Social Research [distributor], 2026-06-27. https://doi.org/10.3886/E250308V1

Project Description

Project Title:  View help for Project Title Pachypsylla venusta genome assembly v1.0
Summary:  View help for Summary The Baylor College of Medicine has sequenced and annotated the Pachypsylla venusta genome as part of the i5k pilot project. This dataset presents the Pachypsylla venusta genome v1.0. This assembly version is the pre-release version, prior to filtering and quality control by the National Center for Biotechnology Information's GenBank resource. If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use.


Resources in this dataset:

Resource Title: Pachypsylla venusta genome assembly v1.0. File Name: pacven_BCM_assembly_v1-0.tar.gzResource Description: The attached tar.gz archive (PVEN_BCM_assembly_v1-0.tgz ) contains the following files: Pven10162013.contigs.fa.gz. This file contains the sequence information of the contigs of the Pachypsylla venusta 1.0 assembly. Pven10162013.scaffolds.fa.gz. This file contains the sequence information of the scaffolds of the Pachypsylla venusta 1.0 assembly. Pven10162013.genome.agp. This file contains information linking the contigs and scaffolds for this assembly. A description of the agp format is available here: http://www.ncbi.nlm.nih.gov/projects/genome/assembly/agp/AGP_Specification.shtml

Resource Title: Pachypsylla venusta genome assembly v1.0.

File Name: pacven_BCM_assembly_v1-0.tar.gz

Resource Description:

The attached tar.gz archive (PVEN_BCM_assembly_v1-0.tgz ) contains the following files:

Pven10162013.contigs.fa.gz. This file contains the sequence information of the contigs of the Pachypsylla venusta 1.0 assembly.

Pven10162013.scaffolds.fa.gz. This file contains the sequence information of the scaffolds of the Pachypsylla venusta 1.0 assembly.

Pven10162013.genome.agp. This file contains information linking the contigs and scaffolds for this assembly. A description of the agp format is available here: http://www.ncbi.nlm.nih.gov/projects/genome/assembly/agp/AGP_Specification.shtml
Original Distribution URL:  View help for Original Distribution URL https://agdatacommons.nal.usda.gov/articles/dataset/Pachypsylla_venusta_genome_assembly_v1_0/24662100

Scope of Project

Subject Terms:  View help for Subject Terms genome assembly; sequence analysis
Collection Notes:  View help for Collection Notes DOI: 10.15482/USDA.ADC/1438575 Citation: Sloan, Daniel B.; Gibbs, Richard A.; Worley, Kim C.; Murali, Shwetha C.; Lee, Sandra L.; Muzny, Donna M.; Chao, Hsu; Dinh, Huyen; Doddapaneni, Harshavardhan; Qu, Jiaxin; Dugan-Perez, Shannon; Han, Yi; Richards, Stephen (2018). Pachypsylla venusta genome assembly v1.0. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1438575 (Downloaded 2026-06-26)


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Published Versions

V1 [2026-06-27]

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