Hyalella azteca Genome Annotations v0.5.3

Principal Investigator(s):  View help for Principal Investigator(s) US Department of Agriculture; National Agricultural Library

Version:  View help for Version V1

Name File Type Size Last Modified
adc_metadata.json application/json 20.4 KB 06/26/2026 03:38:PM
catalog_detail.html text/html 7.4 KB 06/26/2026 11:32:AM
hyaazt_BCM_version_0.5.3.tar.gz application/gzip 150.8 MB 06/26/2026 11:32:AM

Project Citation: 

US Department of Agriculture, and National Agricultural Library. Hyalella azteca Genome Annotations v0.5.3. Ann Arbor, MI: Inter-university Consortium for Political and Social Research [distributor], 2026-06-26. https://doi.org/10.3886/E250292V1

Project Description

Project Title:  View help for Project Title Hyalella azteca Genome Annotations v0.5.3
Summary:  View help for Summary The Baylor College of Medicine recently sequenced and annotated the Hyalella azteca genome as part of the i5k pilot project.

This dataset presents the Hyalella azteca gene set BCM_v_0.5.3, which was generated computationally. RNA-Seq data was used with additional protein homology data for a MAKER automated annotation of the Hyalella azteca genome assembly 1.0. Further annotation method details will be available in a forthcoming publication.

NOTE: This gene set is an unstable pre-release (v0.5.3), and was provided to facilitate manual curation and analyses before the official gene set is released. Gene identifiers from this gene set will likely not be maintained.

If you wish to use this dataset, please follow the Baylor College of Medicine's conditions for data use: https://www.hgsc.bcm.edu/bcm-hgsc-conditions-use


Resources in this dataset:

Resource Title: Hyalella azteca genome annotations v0.5.3 for genome assembly Hyalella azteca v1.0 . File Name: hyaazt_BCM_version_0.5.3.tar.gzResource Description: The attached tar.gz archive (hyaazt_BCM_version_0.5.3.tar.gz) contains the following files: HAZT.CDS.fna. CDS sequences of Hyalella azteca genome annotations v0.5.3. HAZT.faa. Amino acid sequences of Hyalella azteca genome annotations v0.5.3. HAZT.fna. cDNA sequences of Hyalella azteca genome annotations v0.5.3. HAZT.Models.gff3. Gff3 of all gene predictions of Hyalella azteca genome annotations v0.5.3. HAZT.Analysis.gff3 Gff3 of all evidence contributing to Hyalella azteca genome annotations v0.5.3.

Resource Title: Hyalella azteca genome annotations v0.5.3 for genome assembly Hyalella azteca v1.0 .

File Name: hyaazt_BCM_version_0.5.3.tar.gz

Resource Description: The attached tar.gz archive (hyaazt_BCM_version_0.5.3.tar.gz) contains the following files: HAZT.CDS.fna. CDS sequences of Hyalella azteca genome annotations v0.5.3. HAZT.faa. Amino acid sequences of Hyalella azteca genome annotations v0.5.3. HAZT.fna. cDNA sequences of Hyalella azteca genome annotations v0.5.3. HAZT.Models.gff3. Gff3 of all gene predictions of Hyalella azteca genome annotations v0.5.3. HAZT.Analysis.gff3 Gff3 of all evidence contributing to Hyalella azteca genome annotations v0.5.3.
Original Distribution URL:  View help for Original Distribution URL https://agdatacommons.nal.usda.gov/articles/dataset/Hyalella_azteca_Genome_Annotations_v0_5_3/24661509

Scope of Project

Subject Terms:  View help for Subject Terms i5k; Organism project; arthropods
Data Type(s):  View help for Data Type(s) geographic information system (GIS) data
Collection Notes:  View help for Collection Notes DOI: 10.15482/USDA.ADC/1415993 Citation: Hughes, Daniel S.T.; Richards, Stephen; Poynton, Helen (2018). Hyalella azteca Genome Annotations v0.5.3. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1415993 (Downloaded 2026-06-26)


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Published Versions

V1 [2026-06-26]

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