Diaphorina citri genome assembly Diaci 1.9

Principal Investigator(s):  View help for Principal Investigator(s) US Department of Agriculture; National Agricultural Library

Version:  View help for Version V1

Name File Type Size Last Modified
DIACI_v1.9.fasta_.gz application/gzip 158 MB 06/26/2026 11:28:AM
adc_metadata.json application/json 20.5 KB 06/26/2026 02:14:PM
catalog_detail.html text/html 7.1 KB 06/26/2026 11:28:AM

Project Citation: 

US Department of Agriculture, and National Agricultural Library. Diaphorina citri genome assembly Diaci 1.9. Ann Arbor, MI: Inter-university Consortium for Political and Social Research [distributor], 2026-06-26. https://doi.org/10.3886/E250259V1

Project Description

Project Title:  View help for Project Title Diaphorina citri genome assembly Diaci 1.9
Summary:  View help for Summary Diaci1.9 is interim version of the Diaphorina citri psyllid genome based on Pacbio long reads. We have generated 36.2Gb of Pacbio long reads from 41 SMRT cells with a coverage of 80X for the 400-450Mb psyllid genome. The canu assembler was used to create an interim assembly with a contig N50 of 115.8kb and 8352 contigs. DIACI v1.9 has 8,352 contigs compared to 161,988 contigs in Diaci1.1 genome assembly. It has a contig N50 of 115.8kb and does not contain any Ns. Please note that this is an interim assembly so we will not be annotating it.

This project was funded by the U.S. Department of Agriculture under the DEVELOPING AN INFRASTRUCTURE AND PRODUCT TEST PIPELINE TO DELIVER NOVEL THERAPIES FOR CITRUS GREENING DISEASE grant.


Resources in this dataset:

Resource Title: Diaphorina citri genome assembly Diaci 1.9. File Name: DIACIv1.9.fasta.gzResource Description: This resource is a fasta file of the DIACI_v1.9 genome assembly.

Resource Title: Diaphorina citri genome assembly Diaci 1.9.

File Name: DIACIv1.9.fasta.gz

Resource Description: This resource is a fasta file of the DIACI_v1.9 genome assembly.
Original Distribution URL:  View help for Original Distribution URL https://agdatacommons.nal.usda.gov/articles/dataset/Diaphorina_citri_genome_assembly_Diaci_1_9/24660615

Scope of Project

Subject Terms:  View help for Subject Terms genome assembly; Diaphorina citri; Asian citrus psyllid
Collection Notes:  View help for Collection Notes DOI: 10.15482/USDA.ADC/1342727 Citation: Saha, Surya; Hunter, Wayne B.; Mueller, Lukas A.; Brown, Susan (2017). Diaphorina citri genome assembly Diaci 1.9. Ag Data Commons. https://doi.org/10.15482/USDA.ADC/1342727 (Downloaded 2026-06-26)


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Published Versions

V1 [2026-06-26]

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Dublin Core

DDI 2.5

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