Data for Genomic Characterization of Highly Pathogenic H5 Avian Influenza Viruses from Alaska in 2022

Principal Investigator(s):  View help for Principal Investigator(s) Laura C. Scott; Christina A. Ahlstrom; Mia K. Torchetti; Julianna B. Lenoch; Kimberlee B. Beckmen; Megan Boldenow; Evan J. Buck; Bryan Daniels; Krista E. Dilione; Robert Gerlach; Kristina Lantz; Angela Matz; Rebecca L. Poulson; David E. Stallknecht; Raphaela Stimmelmayr; Eric Taylor; Alison R. Williams; Andy M. Ramey; Gay Sheffield; David R. Sinnett

Version:  View help for Version V1

Name File Type Size Last Modified
Data for Genomic Characterization of Highly Pathogenic H5 Avian Influenza Viruses from Alaska in 2022 - ScienceBase-Catalog.pdf application/pdf 382.8 KB 04/13/2025 05:51:PM
Data for Genomic Characterization of Highly Pathogenic H5 Avian Influenza Viruses from Alaska in 2022 _ USGS Science Data Catalog.pdf application/pdf 554.4 KB 04/13/2025 05:50:PM
HPAI_genotype_alaska.csv text/csv 41.4 KB 04/13/2025 05:51:PM
HPAI_genotype_trend_metadata.html text/html 97.5 KB 04/13/2025 05:51:PM
HPAI_genotype_trend_metadata.xml application/xml 44.1 KB 04/13/2025 05:51:PM
HPAI_geotype_alaska_taxonomy.csv text/csv 3.3 KB 06/05/2025 08:42:AM
data-catalog-entry_USGS-667058f6d34e2fc9b7e49c18.html text/html 524.5 KB 04/03/2025 05:28:PM
data_container_USGS-667058f6d34e2fc9b7e49c18.html text/html 56.9 KB 04/13/2025 05:50:PM

Project Citation: 

Scott, Laura C., Ahlstrom, Christina A., Torchetti, Mia K., Lenoch, Julianna B., Beckmen, Kimberlee B., Boldenow, Megan, … Sinnett, David R. Data for Genomic Characterization of Highly Pathogenic H5 Avian Influenza Viruses from Alaska in 2022. Ann Arbor, MI: Inter-university Consortium for Political and Social Research [distributor], 2025-06-05. https://doi.org/10.3886/E232049V1

Project Description

Project Title:  View help for Project Title Data for Genomic Characterization of Highly Pathogenic H5 Avian Influenza Viruses from Alaska in 2022
Summary:  View help for Summary This data set describes genomic sequence information from 2022 used to infer spatiotemporal trends pertaining to the introductions of highly pathogenic H5N1 avian influenza viruses into Alaska and spread among wild birds, backyard poultry, and mammals.
Funding Sources:  View help for Funding Sources United States Department of the Interior. United States Geological Survey
Original Distribution URL:  View help for Original Distribution URL https://data.usgs.gov/datacatalog/data/USGS:667058f6d34e2fc9b7e49c18

Scope of Project

Subject Terms:  View help for Subject Terms H5N1; HPAI; avian influenza; bird flu
Geographic Coverage:  View help for Geographic Coverage Alaska
Time Period(s):  View help for Time Period(s) 4/26/2022 – 12/18/2022
Data Type(s):  View help for Data Type(s) observational data


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Published Versions

V1 [2025-06-05]

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